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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
14
ATAC-seq
12
ChIP-seq
Assay category
26
Transcription
14
DNA accessibility
12
DNA binding
Target of assay
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
572
February, 2021
270
November, 2017
256
May, 2020
191
May, 2021
176
August, 2017
164
July, 2018
82
July, 2019
78
November, 2018
70
October, 2019
63
December, 2017
49
April, 2018
49
November, 2019
46
October, 2018
40
September, 2018
34
December, 2018
33
August, 2021
28
May, 2019
24
May, 2022
23
February, 2018
23
January, 2019
20
April, 2019
13
March, 2020
12
June, 2019
11
September, 2017
9
October, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
Available data
239
bam
231
bigWig
205
bed narrowPeak
205
bigBed narrowPeak
187
bed bed3+
bed broadPeak
187
bigBed broadPeak
41
fastq
26
tsv
1
csv
Organism
52
Homo sapiens
Biosample type
52
primary cell
Organ
44
epithelium
40
pancreas
4
connective tissue
3
heart
2
eye
2
kidney
2
musculature of body
Project
52
AMP
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
52
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bed broadPeak
target.investigated_as!
histone
BIOSAMPLE
ASSAY
52 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
cardiac fibroblast
3
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