Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
2
WGBS
1
ATAC-seq
Assay category
80
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
57
transcription factor
14
control
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
34
December, 2018
25
January, 2019
23
November, 2018
1
October, 2017
Available data
84
bam
84
fastq
71
bigWig
68
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
83
Homo sapiens
Biosample type
60
cell line
23
tissue
Organ
675
pancreas
618
liver
584
connective tissue
440
adipose tissue
295
epithelium
197
brain
181
heart
168
vasculature
167
blood vessel
98
artery
78
limb
66
bone element
66
kidney
60
blood
60
bodily fluid
40
nerve
36
embryo
24
musculature of body
23
spleen
16
vein
8
skeleton
3
eye
1
pericardium
1
pituitary gland
Project
83
AMP
Genome assembly (visualization)
69
GRCh38
67
hg19
Lab
83
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
83 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
cell line
GM12878
60
tissue
spleen
20
2
1
Download