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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
2
DNase-seq
1
FAIRE-seq
Assay category
77
DNA binding
3
DNA accessibility
Target of assay
51
transcription factor
16
histone
16
histone modification
10
RNA binding protein
10
chromatin remodeller
9
broad histone mark
8
control
7
narrow histone mark
Date released
27
December, 2018
20
October, 2019
18
January, 2019
15
November, 2018
Available data
80
bam
70
bigWig
67
bed narrowPeak
67
bigBed narrowPeak
60
fastq
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
bedpe bed3+
1
tar
Organism
80
Homo sapiens
Biosample type
60
cell line
20
primary cell
Organ
689
pancreas
599
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
137
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
80
AMP
Genome assembly (visualization)
69
hg19
66
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bedpe bed3+
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
cell line
GM12878
60
primary cell
endothelial cell of umbilical vein
17
2
1
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