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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
ChIP-seq
7
WGBS
1
FAIRE-seq
Assay category
190
DNA binding
7
DNA methylation
1
DNA accessibility
Target of assay
92
histone
92
histone modification
69
transcription factor
58
broad histone mark
34
narrow histone mark
29
control
26
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
572
February, 2021
328
November, 2017
283
May, 2020
277
May, 2021
267
August, 2017
241
October, 2019
164
July, 2018
120
May, 2019
94
December, 2017
82
July, 2019
79
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
31
June, 2019
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
1
March, 2019
Available data
207
bam
177
bigWig
170
bed narrowPeak
170
bigBed narrowPeak
88
fastq
9
bed bed3+
9
bed broadPeak
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
198
Homo sapiens
Biosample type
132
tissue
61
cell line
5
primary cell
Organ
50
blood vessel
50
liver
50
vasculature
28
brain
21
heart
15
blood
15
bodily fluid
8
spleen
7
limb
7
musculature of body
7
pancreas
5
artery
5
epithelium
5
kidney
Project
198
AMP
Genome assembly (visualization)
166
GRCh38
159
hg19
Lab
198
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
198 results
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Clear Filters
ChIP-seq
WGBS
FAIRE-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 9 more…
cell line
HepG2
45
1
GM12878
15
primary cell
kidney epithelial cell
5
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