Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
target gene predictions
25
candidate regulatory elements
12
chromatin state
6
binding sites
5
accessible chromatin
2
histone modifications
Date released
51
February, 2024
36
September, 2022
19
February, 2021
4
June, 2020
3
May, 2021
2
November, 2021
2
October, 2022
Available data
105
bed bed3+
12
bed bed9
7
tsv
1
bigWig
0
bam
Organism
117
Homo sapiens
Biosample type
68
cell line
40
tissue
9
primary cell
Organ
597
epithelium
386
kidney
375
brain
371
connective tissue
352
musculature of body
309
lung
283
intestine
225
limb
219
heart
215
bodily fluid
205
embryo
204
blood
199
skin of body
195
vasculature
172
pancreas
170
large intestine
150
blood vessel
145
extraembryonic component
116
liver
116
stomach
107
eye
87
mammary gland
84
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
57
adipose tissue
54
artery
49
thymus
45
gonad
40
esophagus
37
spinal cord
32
spleen
23
lymphoid tissue
23
testis
21
ovary
21
thyroid gland
21
vein
18
nerve
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
12
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
115
AMP
2
ENCODE
Genome assembly (visualization)
117
hg19
65
GRCh38
BIOSAMPLE
TYPE
117 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
cell line
HeLa-S3
55
5
3
1
spinal cord
2
1
Ishikawa
1
tissue
spinal cord
8
14
7
1
uterus
2
3
1
1
endometrium cancer
1
1
endometrium
1
primary cell
astrocyte of the spinal cord
1
2
1
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
Download