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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
170
ChIP-seq
46
ATAC-seq
Assay category
188
Transcription
170
DNA binding
46
DNA accessibility
Target of assay
119
histone
119
histone modification
61
narrow histone mark
58
broad histone mark
46
control
5
RNA binding protein
5
transcription factor
Date released
573
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
279
May, 2021
251
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
86
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
51
August, 2021
49
April, 2018
39
February, 2018
34
December, 2018
30
January, 2019
25
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
4
February, 2023
3
August, 2018
3
June, 2018
1
March, 2019
Available data
404
bam
357
bigWig
189
tsv
124
bed narrowPeak
97
bigBed narrowPeak
50
tagAlign
1
bed broadPeak
1
bedpe
1
fastq
1
hic
0
bed bed3+
Organism
404
Homo sapiens
Biosample type
309
tissue
95
primary cell
Organ
193
liver
50
blood vessel
50
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
3
pancreas
Project
359
AMP
45
T1D
Genome assembly (visualization)
357
hg19
303
GRCh38
Lab
358
AMP-T2D consortium
45
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
11
inconsistent ontology term
BIOSAMPLE
ASSAY
404 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
liver
143
50
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
primary cell
kidney epithelial cell
5
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
+ See 21 more…
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