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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
31
ChIP-seq
3
small RNA-seq
2
WGBS
Assay category
398
Transcription
31
DNA binding
2
DNA methylation
Target of assay
19
control
12
transcription factor
Date released
386
February, 2021
18
October, 2018
15
August, 2017
12
July, 2019
Available data
442
bam
425
bigWig
401
tsv
44
fastq
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
431
Homo sapiens
Biosample type
429
tissue
2
primary cell
Organ
523
connective tissue
483
pancreas
431
adipose tissue
276
liver
184
epithelium
98
heart
88
vasculature
86
blood vessel
63
artery
58
bone element
43
brain
29
kidney
22
embryo
22
limb
15
nerve
13
musculature of body
10
spleen
7
vein
6
blood
6
bodily fluid
2
eye
2
pericardium
Project
431
AMP
Genome assembly (visualization)
412
GRCh38
410
hg19
Lab
431
AMP-T2D consortium
Audit category:
12
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
431 results
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total RNA-seq
ChIP-seq
small RNA-seq
WGBS
tissue
adipose tissue
381
1
2
subcutaneous adipose tissue
6
10
1
omental fat pad
4
8
1
white adipose tissue
12
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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