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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
14
total RNA-seq
Assay category
22
DNA binding
14
Transcription
Target of assay
12
histone
12
histone modification
8
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
13
December, 2017
13
February, 2018
8
August, 2021
2
May, 2021
March, 2020
Available data
36
bam
29
bigWig
27
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Organism
36
Homo sapiens
Biosample type
28
in vitro differentiated cells
8
cell line
Organ
691
liver
691
pancreas
595
connective tissue
444
adipose tissue
323
epithelium
304
heart
255
brain
193
vasculature
188
blood vessel
154
kidney
117
limb
106
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
43
nerve
36
embryo
24
spleen
20
vein
18
ureter
12
eye
8
skeleton
1
pericardium
1
pituitary gland
1
spinal cord
0
esophagus
Project
36
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
36
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
month_released!
March, 2020
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
18
4
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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