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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
32
ChIP-seq
5
ATAC-seq
4
DNase-seq
2
WGBS
1
FAIRE-seq
Assay category
89
Transcription
32
DNA binding
10
DNA accessibility
2
DNA methylation
Target of assay
103
histone modification
histone
52
narrow histone mark
49
broad histone mark
transcription factor
31
control
8
RNA binding protein
3
chromatin remodeller
Date released
567
February, 2021
256
May, 2020
195
June, 2019
187
May, 2021
164
July, 2018
133
August, 2017
82
July, 2019
74
November, 2017
70
October, 2019
49
April, 2018
48
November, 2019
40
September, 2018
33
August, 2021
31
October, 2018
24
May, 2022
23
February, 2018
23
May, 2019
23
November, 2018
21
December, 2017
14
April, 2019
13
March, 2020
11
September, 2017
9
January, 2019
9
October, 2017
6
December, 2018
6
November, 2020
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
138
fastq
133
bam
103
bigWig
89
tsv
11
bed narrowPeak
11
tagAlign
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
132
Homo sapiens
Biosample type
108
tissue
18
primary cell
7
in vitro differentiated cells
Organ
109
pancreas
15
epithelium
11
connective tissue
10
liver
4
adipose tissue
Project
133
AMP
Genome assembly (visualization)
103
hg19
101
GRCh38
Lab
133
AMP-T2D consortium
month_released!
December, 2019
target.investigated_as!
histone
transcription factor
BIOSAMPLE
ASSAY
133 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
tissue
islet of Langerhans
89
1
1
1
liver
9
adipose tissue
1
2
pancreas
2
right lobe of liver
1
+ See 1 more…
primary cell
pancreatic alpha cell
6
1
pancreatic beta cell
6
1
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
in vitro differentiated cells
adipocyte
6
1
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