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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
15
total RNA-seq
7
ATAC-seq
Assay category
23
DNA binding
15
Transcription
7
DNA accessibility
Target of assay
22
histone
22
histone modification
13
broad histone mark
10
control
narrow histone mark
Date released
572
February, 2021
363
November, 2017
256
May, 2020
235
May, 2021
230
August, 2017
207
June, 2019
164
July, 2018
132
October, 2019
87
November, 2018
86
May, 2019
82
July, 2019
78
December, 2017
65
October, 2018
57
April, 2019
57
September, 2018
55
November, 2019
49
April, 2018
40
August, 2021
34
December, 2018
31
February, 2018
27
January, 2019
24
May, 2022
14
October, 2017
13
March, 2020
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
0
February, 2020
Available data
47
fastq
45
bam
40
tsv
36
bigWig
19
bed narrowPeak
12
tagAlign
5
bigBed narrowPeak
3
bed broadPeak
Organism
45
Homo sapiens
Biosample type
31
in vitro differentiated cells
14
tissue
Organ
10
embryo
8
brain
4
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
45
AMP
Genome assembly (visualization)
35
GRCh38
34
hg19
Lab
45
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
1
inconsistent control read length
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
+ See 2 more…
tissue
brain
7
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
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