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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 545total RNA-seq
  • 18ATAC-seq
  • 8ChIP-seq
  • 1pCHi-C
Assay category
  • 545Transcription
  • 18DNA accessibility
  • 8DNA binding
Target of assay
  • 5transcription factor
  • 3control
Date released
  • 572February, 2021
  • 392November, 2017
  • 283May, 2020
  • 282August, 2017
  • 277May, 2021
  • 250October, 2019
  • 218June, 2019
  • 164July, 2018
  • 120May, 2019
  • 94December, 2017
  • 87November, 2018
  • 82July, 2019
  • 79April, 2019
  • 76October, 2018
  • 72September, 2018
  • 59November, 2019
  • 49April, 2018
  • 49August, 2021
  • 39February, 2018
  • 34December, 2018
  • 30January, 2019
  • 24May, 2022
  • 16March, 2020
  • 15October, 2017
  • 11September, 2017
  • 6November, 2020
  • 5December, 2019
  • 3August, 2018
  • 3June, 2018
  • 1March, 2019
Available data
  • 572bam
  • 559tsv
  • 551bigWig
  • 89txt
  • 45fastq
  • 23bed narrowPeak
  • 8tagAlign
  • 6csv
  • 4bed bedgraph
  • 2bed bed3
  • 2bed bed3+
Organism
  • 572Homo sapiens
Biosample type
  • 452tissue
  • 95cell line
  • 22in vitro differentiated cells
  • 3primary cell
Organ
  • 451connective tissue
  • 386adipose tissue
  • 66artery
  • 66blood vessel
  • 66bone element
  • 66heart
  • 66vasculature
  • 26epithelium
  • 26pancreas
  • 8skeleton
  • 6limb
  • 1liver
Project
  • 572AMP
Genome assembly (visualization)
  • 569hg19
  • 568GRCh38
Lab
  • 572AMP-T2D consortium
Audit category:
  • 44inconsistent ontology term
  • 1inconsistent replicate
BIOSAMPLE
ASSAY

572 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
adipose tissue381
bone tissue58
visceral abdominal adipose tissue3
subcutaneous adipose tissue2
distal epiphysis1
cell line
smooth muscle cell of the coronary artery5286
EndoC_BH126
iPSC derived cell line2
HepG21
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)18
adipocyte4
primary cell
osteoblast111
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