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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
26
ATAC-seq
25
total RNA-seq
Assay category
38
DNA binding
26
DNA accessibility
25
Transcription
Target of assay
17
histone
17
histone modification
15
transcription factor
10
broad histone mark
7
RNA binding protein
7
narrow histone mark
6
chromatin remodeller
6
control
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
230
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
89
bam
58
bed narrowPeak
57
bigWig
30
fastq
25
tsv
21
bigBed narrowPeak
2
bedpe bed3+
2
hic
Organism
89
Homo sapiens
Biosample type
46
tissue
38
cell line
5
in vitro differentiated cells
Organ
53
pancreas
18
blood
18
bodily fluid
15
epithelium
7
spleen
5
liver
1
adipose tissue
1
connective tissue
Project
89
AMP
Genome assembly (visualization)
83
GRCh38
83
hg19
Lab
89
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
organ_slims!
intestine
vein
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
19
19
spleen
7
adipose tissue(adipose white tissue)
1
cell line
GM12878
18
EndoC_BH1
13
1
1
HepG2
5
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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