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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
120
ChIP-seq
116
total RNA-seq
48
single cell RNA-seq
Assay category
187
DNA accessibility
164
Transcription
120
DNA binding
Target of assay
111
histone
111
histone modification
66
broad histone mark
45
narrow histone mark
control
9
RNA binding protein
9
transcription factor
Date released
569
February, 2021
321
November, 2017
276
May, 2021
260
May, 2020
251
August, 2017
211
October, 2019
210
June, 2019
164
July, 2018
97
May, 2019
81
November, 2018
79
July, 2019
73
December, 2017
72
September, 2018
65
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
41
August, 2021
31
February, 2018
30
December, 2018
26
January, 2019
24
May, 2022
16
March, 2020
13
October, 2017
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
1
March, 2019
Available data
471
bam
471
bigWig
307
bed narrowPeak
307
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
164
tsv
50
fastq
Organism
471
Homo sapiens
Biosample type
372
tissue
99
primary cell
Organ
158
pancreas
84
kidney
55
brain
55
epithelium
48
heart
47
musculature of body
46
vasculature
44
blood vessel
38
limb
18
ureter
17
connective tissue
6
eye
5
artery
2
liver
1
adipose tissue
Project
471
AMP
Genome assembly (visualization)
470
GRCh38
448
hg19
Lab
471
AMP-T2D consortium
Audit category:
30
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
471 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
116
muscle of leg
13
6
heart
18
muscle of arm
17
ascending aorta
1
13
+ See 41 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
+ See 32 more…
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