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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
34
total RNA-seq
15
small RNA-seq
9
WGBS
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
120
DNA binding
52
Transcription
9
DNA methylation
8
DNA accessibility
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
26
control
5
RNA binding protein
5
transcription factor
Date released
392
November, 2017
283
May, 2020
277
May, 2021
265
August, 2017
250
October, 2019
217
June, 2019
186
February, 2021
164
July, 2018
120
May, 2019
94
December, 2017
86
November, 2018
79
April, 2019
72
September, 2018
69
July, 2019
58
November, 2019
53
October, 2018
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
14
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
189
bam
169
bigWig
104
bed narrowPeak
99
bigBed narrowPeak
52
tsv
22
bed bedMethyl
22
bigBed bedMethyl
4
bed bed3+
4
hdf5
Organism
189
Homo sapiens
Biosample type
169
tissue
20
primary cell
Organ
59
blood vessel
59
vasculature
42
heart
41
brain
16
connective tissue
adipose tissue
12
kidney
12
musculature of body
10
epithelium
8
artery
8
limb
7
liver
6
pancreas
pericardium
Project
189
AMP
Genome assembly (visualization)
162
GRCh38
156
hg19
Lab
189
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
adipose tissue
pericardium
BIOSAMPLE
ASSAY
189 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
thoracic aorta
16
2
1
ascending aorta
16
1
temporal lobe
15
1
1
aorta
13
2
angular gyrus
13
+ See 21 more…
primary cell
kidney epithelial cell
5
1
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 8 more…
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