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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
59
ChIP-seq
26
total RNA-seq
14
ATAC-seq
3
single cell RNA-seq
Assay category
201
DNA accessibility
59
DNA binding
29
Transcription
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
transcription factor
Date released
567
February, 2021
283
May, 2020
273
May, 2021
243
October, 2019
235
August, 2017
214
June, 2019
164
July, 2018
149
November, 2017
115
May, 2019
82
July, 2019
73
April, 2019
72
September, 2018
61
October, 2018
58
November, 2019
52
December, 2017
49
April, 2018
49
August, 2021
39
February, 2018
24
May, 2022
23
November, 2018
16
January, 2019
16
March, 2020
15
October, 2017
11
September, 2017
6
December, 2018
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
289
bam
281
bigWig
252
bed narrowPeak
220
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
76
fastq
29
tsv
1
csv
Organism
289
Homo sapiens
Biosample type
163
tissue
126
primary cell
Organ
80
epithelium
80
kidney
77
pancreas
43
musculature of body
34
heart
32
limb
30
brain
18
ureter
17
connective tissue
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
289
AMP
Genome assembly (visualization)
281
GRCh38
258
hg19
Lab
289
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
32
missing controlled_by
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
289 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic ductal cell
13
4
4
1
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 24 more…
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