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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
321
ChIP-seq
Assay category
321
DNA binding
Target of assay
243
transcription factor
75
histone
75
histone modification
control
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
569
February, 2021
321
November, 2017
276
May, 2021
260
May, 2020
251
August, 2017
211
October, 2019
210
June, 2019
164
July, 2018
97
May, 2019
81
November, 2018
79
July, 2019
73
December, 2017
72
September, 2018
65
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
41
August, 2021
February, 2018
30
December, 2018
26
January, 2019
24
May, 2022
16
March, 2020
13
October, 2017
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
1
March, 2019
Available data
321
bam
318
bigWig
313
bed narrowPeak
312
bigBed narrowPeak
265
fastq
70
bed broadPeak
67
tagAlign
64
bigBed broadPeak
3
tar
Organism
321
Homo sapiens
Biosample type
258
cell line
57
tissue
6
primary cell
Organ
258
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
321
AMP
Genome assembly (visualization)
280
GRCh38
264
hg19
Lab
321
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
February, 2018
target.investigated_as!
control
BIOSAMPLE
ASSAY
321 results
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Clear Filters
ChIP-seq
cell line
HepG2
258
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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