Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
total RNA-seq
34
ChIP-seq
18
ATAC-seq
4
DNase-seq
Assay category
112
Transcription
34
DNA binding
22
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
132
February, 2021
26
October, 2019
5
May, 2019
3
July, 2019
2
June, 2019
Available data
168
bam
143
bigWig
116
tsv
88
txt
82
bed narrowPeak
25
bigBed narrowPeak
6
tagAlign
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
168
Homo sapiens
Biosample type
100
tissue
66
cell line
2
primary cell
Organ
689
pancreas
599
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
137
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
168
AMP
Genome assembly (visualization)
159
GRCh38
159
hg19
Lab
168
AMP-T2D consortium
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
168 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
tissue
bone tissue
58
tibial artery
23
1
2
coronary artery
5
1
2
distal epiphysis
1
distal epiphysis of femur
1
+ See 6 more…
cell line
smooth muscle cell of the coronary artery
52
6
8
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download