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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 99ChIP-seq
  • 58total RNA-seq
  • 11ATAC-seq
  • 9DNase-seq
  • 2WGBS
  • 1FAIRE-seq
Assay category
  • 99DNA binding
  • 58Transcription
  • 21DNA accessibility
  • 2DNA methylation
Target of assay
  • 70histone
  • 70histone modification
  • 45broad histone mark
  • 25narrow histone mark
  • 21control
  • 8transcription factor
  • 4RNA binding protein
Date released
  • 66February, 2021
  • 50May, 2019
  • 46October, 2019
  • 9July, 2019
  • 5June, 2019
  • 3November, 2017
  • 1March, 2020
Available data
  • 180bam
  • 150bigWig
  • 129bed narrowPeak
  • 79bigBed narrowPeak
  • 68tsv
  • 13bed broadPeak
  • 13bigBed broadPeak
  • 11bed bed3+
  • 6tagAlign
  • 3fastq
  • 3hic
  • 2bedpe bed3+
  • 2hdf5
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1tar
Organism
  • 180Homo sapiens
Biosample type
  • 87tissue
  • 66cell line
  • 27primary cell
Organ
  • 689pancreas
  • 681liver
  • 593connective tissue
  • 442adipose tissue
  • 317epithelium
  • 243brain
  • 211heart
  • 185vasculature
  • 180blood vessel
  • 144kidney
  • 114limb
  • 102artery
  • 66bone element
  • 60blood
  • 60bodily fluid
  • 57musculature of body
  • 42nerve
  • 36embryo
  • 24spleen
  • 20vein
  • 18ureter
  • 8skeleton
  • 7eye
  • 1pericardium
  • 1pituitary gland
Project
  • 180AMP
Genome assembly (visualization)
  • 154hg19
  • 152GRCh38
Lab
  • 180AMP-T2D consortium
BIOSAMPLE
ASSAY

180 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
tissue
tibial artery2312
thoracic aorta1621
ascending aorta1611
aorta1312
coronary artery512
cell line
smooth muscle cell of the coronary artery6528
primary cell
endothelial cell of umbilical vein1721
brain microvascular endothelial cell31
endothelial cell of coronary artery1
kidney capillary endothelial cell1
smooth muscle cell of the coronary artery1
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