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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22ChIP-seq
  • 14total RNA-seq
Assay category
  • 22DNA binding
  • 14Transcription
Target of assay
  • 12histone
  • 12histone modification
  • 8narrow histone mark
  • 7control
  • 4broad histone mark
  • 3transcription factor
Date released
  • 13December, 2017
  • 13February, 2018
  • 8August, 2021
  • 2May, 2021
Available data
  • 36bam
  • 29bigWig
  • 27fastq
  • 14bed narrowPeak
  • 14tsv
  • 3bed bed3+
Organism
  • 36Homo sapiens
Biosample type
  • 28in vitro differentiated cells
  • 8cell line
Organ
  • 689pancreas
  • 681liver
  • 593connective tissue
  • 442adipose tissue
  • 317epithelium
  • 243brain
  • 211heart
  • 185vasculature
  • 180blood vessel
  • 144kidney
  • 114limb
  • 102artery
  • 66bone element
  • 60blood
  • 60bodily fluid
  • 57musculature of body
  • 42nerve
  • 36embryo
  • 24spleen
  • 20vein
  • 18ureter
  • 8skeleton
  • 7eye
  • 1pericardium
  • 1pituitary gland
Project
  • 36AMP
Genome assembly (visualization)
  • 29GRCh38
  • 29hg19
Lab
  • 36AMP-T2D consortium
Audit category:
  • 6inconsistent ontology term
Audit category:
  • 1missing controlled_by
Audit category:
  • 3inconsistent control read length
BIOSAMPLE
ASSAY

36 results

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Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm184
Hepatic endoderm4
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
cell line
H1-hESC8
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