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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 65ChIP-seq
  • 36DNase-seq
  • 8ATAC-seq
  • 4total RNA-seq
  • 1WGBS
Assay category
  • 65DNA binding
  • 44DNA accessibility
  • 4Transcription
  • 1DNA methylation
Target of assay
  • 48histone
  • 48histone modification
  • 34broad histone mark
  • 17control
  • 14narrow histone mark
Date released
  • 68October, 2019
  • 32June, 2019
  • 7May, 2019
  • 6February, 2021
  • 1July, 2019
Available data
  • 114bam
  • 92bed narrowPeak
  • 91bigWig
  • 84bigBed narrowPeak
  • 36bed bed3+
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 7tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 114Homo sapiens
Biosample type
  • 114tissue
Organ
  • 689pancreas
  • 681liver
  • 593connective tissue
  • 442adipose tissue
  • 317epithelium
  • 243brain
  • 211heart
  • 185vasculature
  • 180blood vessel
  • 144kidney
  • 114limb
  • 102artery
  • 66bone element
  • 60blood
  • 60bodily fluid
  • 57musculature of body
  • 42nerve
  • 36embryo
  • 24spleen
  • 20vein
  • 18ureter
  • 8skeleton
  • 7eye
  • 1pericardium
  • 1pituitary gland
Project
  • 114AMP
Genome assembly (visualization)
  • 96GRCh38
  • 96hg19
Lab
  • 114AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

114 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve35214
tibial artery2321
muscle of leg7131
muscle of arm17
distal epiphysis of femur1
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