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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 33DNase-seq
  • 17ChIP-seq
  • 4total RNA-seq
  • 2small RNA-seq
  • 1WGBS
Assay category
  • 33DNA accessibility
  • 17DNA binding
  • 6Transcription
  • 1DNA methylation
Target of assay
  • 14histone
  • 14histone modification
  • 8broad histone mark
  • 6narrow histone mark
  • 3control
Date released
  • 43June, 2019
  • 7May, 2019
  • 5July, 2019
  • 2March, 2020
Available data
  • 68bigWig
  • 60bed narrowPeak
  • 57bam
  • 47bigBed narrowPeak
  • 46bed broadPeak
  • 34bed bed3+
  • 33bigBed broadPeak
  • 15tagAlign
  • 9tsv
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 2bedpe bed3+
  • 2fastq
  • 2hic
  • 1txt
Organism
  • 57Homo sapiens
Biosample type
  • 44tissue
  • 13primary cell
Organ
  • 689pancreas
  • 681liver
  • 593connective tissue
  • 442adipose tissue
  • 317epithelium
  • 243brain
  • 211heart
  • 185vasculature
  • 180blood vessel
  • 144kidney
  • 114limb
  • 102artery
  • 66bone element
  • 60blood
  • 60bodily fluid
  • 57musculature of body
  • 42nerve
  • 36embryo
  • 24spleen
  • 20vein
  • 18ureter
  • 8skeleton
  • 7eye
  • 1pericardium
  • 1pituitary gland
Project
  • 57AMP
Genome assembly (visualization)
  • 53GRCh38
  • 53hg19
Lab
  • 57AMP-T2D consortium
Audit category:
  • 9inconsistent ontology term
BIOSAMPLE
ASSAY

57 results

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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of leg1371
muscle of arm17
psoas muscle2
skeletal muscle tissue11
forelimb muscle1
primary cell
skeletal muscle satellite cell811
skeletal muscle cell12
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