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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
DNase-seq
1
FAIRE-seq
1
total RNA-seq
Assay category
17
DNA binding
3
DNA accessibility
1
Transcription
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
20
October, 2019
1
July, 2019
Available data
21
bam
16
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
1
tsv
Organism
21
Homo sapiens
Biosample type
21
primary cell
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
16
hg19
13
GRCh38
Lab
21
AMP-T2D consortium
organ_slims!
heart
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
DNase-seq
FAIRE-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
17
2
1
pericardium fibroblast
1
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