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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
Hi-C
Assay category
4
DNA accessibility
3
3D chromatin structure
Date released
4
February, 2023
3
July, 2019
August, 2021
Available data
bam
718
bigWig
540
tsv
202
bed narrowPeak
107
bigBed narrowPeak
104
fastq
36
bed bed3+
28
tagAlign
23
bed broadPeak
22
bigBed broadPeak
6
bed bed3
4
bed bedMethyl
4
bed bedgraph
4
bigBed bedMethyl
3
bedpe bed3+
3
hdf5
3
hic
1
tar
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
primary cell
Organ
5
connective tissue
3
brain
2
blood vessel
2
epithelium
2
liver
2
vasculature
1
musculature of body
1
pancreas
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
7
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bam
month_released!
August, 2021
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
Hi-C
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
primary cell
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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