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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
43
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
March, 2020
1
October, 2022
Available data
136
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
136
Homo sapiens
Biosample type
100
tissue
30
cell line
6
primary cell
Organ
552
epithelium
335
connective tissue
309
kidney
307
brain
278
musculature of body
238
lung
226
intestine
190
bodily fluid
181
blood
177
embryo
175
limb
169
heart
165
skin of body
163
vasculature
152
pancreas
136
large intestine
120
blood vessel
112
extraembryonic component
100
liver
98
eye
92
stomach
76
uterus
73
mammary gland
70
bone element
63
prostate gland
63
small intestine
56
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
47
adipose tissue
46
artery
37
thymus
36
gonad
32
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
thyroid gland
16
ovary
16
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
Project
130
AMP
6
ENCODE
Genome assembly (visualization)
136
hg19
8
GRCh38
files.file_type!
bed gappedPeak
month_released!
March, 2020
BIOSAMPLE
TYPE
136 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
tissue
large intestine
27
14
1
1
sigmoid colon
10
6
1
transverse colon
8
5
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 4 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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