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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
2
Capture-C
1
ChIP-seq
1
pCHi-C
Assay category
4
DNA accessibility
1
DNA binding
Target of assay
1
control
Date released
4
February, 2023
2
August, 2021
1
August, 2017
1
February, 2021
Available data
593
bam
bigWig
478
tsv
101
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
8
Homo sapiens
Biosample type
7
in vitro differentiated cells
1
primary cell
Organ
8
connective tissue
2
liver
2
pancreas
1
embryo
1
musculature of body
Project
8
AMP
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
organ_slims!
pituitary gland
spinal cord
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
Capture-C
ChIP-seq
pCHi-C
in vitro differentiated cells
adipocyte
1
1
1
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
osteoblast
1
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