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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
19
transcription factor
12
histone
12
histone modification
broad histone mark
6
narrow histone mark
2
RNA binding protein
2
control
Date released
187
June, 2019
27
August, 2017
10
December, 2017
9
November, 2018
8
October, 2019
4
August, 2021
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
238
fastq
233
bam
211
bigWig
89
tsv
86
bed narrowPeak
40
tagAlign
27
bed bed3+
24
bigBed narrowPeak
19
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
27
Homo sapiens
Biosample type
20
tissue
7
in vitro differentiated cells
Organ
13
pancreas
11
connective tissue
4
adipose tissue
3
liver
Project
27
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
27
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
4
inconsistent control read length
files.file_type!
hic
month_released!
February, 2023
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
13
white adipose tissue
4
liver
3
in vitro differentiated cells
adipocyte
7
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