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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
208
accessible chromatin
118
target gene predictions
99
candidate regulatory elements
42
binding sites
38
variant allelic effects
27
histone modifications
3
chromatin state
2
caQTL
2
eQTL
Date released
127
November, 2021
102
February, 2021
95
September, 2022
58
February, 2024
23
June, 2020
20
January, 2021
17
May, 2021
15
November, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
10
May, 2024
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
539
bed bed3+
tsv
176
bigWig
78
txt
46
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
539
Homo sapiens
Biosample type
440
primary cell
54
tissue
31
cell line
14
in vitro differentiated cells
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
385
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
538
hg19
185
GRCh38
files.file_type!
tsv
organ_slims!
limb
penis
BIOSAMPLE
TYPE
539 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
7
3
2
2
1
2
1
hepatocyte
8
3
2
1
2
4
endothelial cell of umbilical vein
2
4
6
2
1
keratinocyte
2
5
3
1
1
2
1
endothelial cell of hepatic sinusoid
6
6
+ See 93 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
esophagus squamous epithelium
1
2
6
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 12 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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