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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
2
Capture-C
2
total RNA-seq
Assay category
2
DNA accessibility
2
Transcription
Date released
2
August, 2021
2
May, 2021
1
March, 2019
1
October, 2017
Available data
310
bigWig
274
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
6
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
2
tissue
Organ
2
connective tissue
2
pancreas
Project
6
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
AMP-T2D consortium
2
Kyle Gaulton, UCSD
2
Struan F.A. Grant, CHOP
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
lab.title!
AMP-T2D consortium
month_released!
January, 2018
organ_slims!
brain
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
Capture-C
total RNA-seq
in vitro differentiated cells
adipocyte
1
osteoblast
1
primary cell
CD8-positive, alpha-beta T cell
2
tissue
islet of Langerhans
2
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