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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
970
histone modifications
895
accessible chromatin
839
candidate regulatory elements
817
binding sites
639
gene expression
523
target gene predictions
158
differential activity
124
variant allelic effects
72
Fine-mapped variants
40
chromatin state
37
eQTL
13
caQTL
4
variant to gene
3
hQTL
2
meQTL
2
other
2
pQTL
1
representative DNase hypersensitivity sites
1
sQTL
Date released
2587
February, 2021
September, 2022
373
May, 2021
360
February, 2024
333
November, 2021
288
June, 2020
286
September, 2023
135
May, 2020
124
March, 2020
101
August, 2021
101
October, 2022
83
January, 2020
57
March, 2023
56
January, 2021
47
February, 2020
41
November, 2022
34
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4243
bed bed3+
899
tsv
540
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
0
bed gappedPeak
Organism
5095
Homo sapiens
Biosample type
1856
primary cell
1784
cell line
1144
tissue
352
in vitro differentiated cells
4
stem cell
Organ
768
epithelium
410
kidney
312
connective tissue
256
brain
204
pancreas
176
vasculature
159
musculature of body
141
bodily fluid
136
blood
134
embryo
130
heart
129
blood vessel
122
intestine
100
limb
100
lung
99
skin of body
97
liver
82
eye
74
large intestine
70
uterus
55
adipose tissue
49
stomach
47
artery
46
bone element
46
extraembryonic component
45
mammary gland
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
26
small intestine
25
ureter
24
placenta
23
gonad
21
esophagus
18
spinal cord
16
thymus
15
lymphatic vessel
15
spleen
14
nerve
14
vein
12
pituitary gland
12
testis
10
bronchus
10
ovary
10
thyroid gland
9
bone marrow
9
lymphoid tissue
9
skeleton
6
breast
6
mouth
5
trachea
4
tongue
4
urinary bladder
3
vagina
1
nose
Project
4446
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
2
community
1
ITG
Genome assembly (visualization)
4331
hg19
898
GRCh38
1
hg18
month_released!
November, 2020
September, 2022
BIOSAMPLE
TYPE
5142 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
variant allelic effects
Fine-mapped variants
chromatin state
eQTL
caQTL
variant to gene
hQTL
meQTL
other
pQTL
representative DNase hypersensitivity sites
sQTL
primary cell
monocyte
86
18
1
15
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
endothelial cell
1
15
2
8
7
2
1
2
fibroblast
16
1
4
6
hepatocyte
4
8
1
9
2
2
+ See 427 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
EndoC_BH1
1
8
1
8
1
1
1
breast cancer cell
11
9
+ See 745 more…
tissue
kidney
2
10
15
1
7
1
1
heart
1
5
18
1
3
1
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
islet of Langerhans
1
5
2
9
1
1
3
1
2
1
+ See 246 more…
in vitro differentiated cells
neural progenitor cell
14
10
1
7
1
adipocyte
1
4
2
1
1
4
4
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 116 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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