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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1438
candidate regulatory elements
1208
target gene predictions
962
histone modifications
804
binding sites
782
accessible chromatin
110
variant allelic effects
36
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2243
February, 2021
1419
September, 2022
311
November, 2021
286
February, 2024
279
May, 2021
264
June, 2020
121
May, 2020
98
October, 2022
56
January, 2021
January, 2020
43
March, 2020
41
November, 2022
39
May, 2024
36
August, 2021
31
February, 2023
30
August, 2017
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5373
bed bed3+
731
bed bed9
629
tsv
448
bigWig
34
bed bed9+
32
bigBed bed9
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5327
Homo sapiens
Biosample type
2064
cell line
1545
primary cell
1415
tissue
343
in vitro differentiated cells
4
stem cell
Organ
545
epithelium
329
connective tissue
kidney
291
brain
276
musculature of body
239
lung
intestine
190
bodily fluid
181
blood
178
embryo
169
limb
166
heart
165
skin of body
156
pancreas
156
vasculature
137
large intestine
118
blood vessel
112
extraembryonic component
101
liver
96
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4982
AMP
311
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5365
hg19
743
GRCh38
1
hg18
month_released!
January, 2020
organ_slims!
intestine
kidney
BIOSAMPLE
TYPE
5373 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 744 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
2
15
2
2
1
+ See 306 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 184 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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