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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
30
ChIP-seq
2
Capture-C
Assay category
76
DNA accessibility
30
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
135
May, 2021
123
October, 2019
115
August, 2017
108
August, 2021
69
February, 2023
40
May, 2024
39
May, 2022
37
November, 2019
32
September, 2018
27
December, 2017
27
May, 2020
25
February, 2021
16
February, 2018
9
July, 2019
6
October, 2017
3
March, 2020
2
September, 2017
1
April, 2019
1
November, 2017
1
November, 2020
Available data
123
tsv
106
bed narrowPeak
64
xls
57
txt
49
bam
47
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
108
Homo sapiens
Biosample type
64
tissue
27
in vitro differentiated cells
14
cell line
3
primary cell
Organ
64
kidney
17
liver
4
connective tissue
3
epithelium
Project
108
AMP
Genome assembly (visualization)
90
GRCh38
43
hg19
Lab
64
Katalin Susztak, Upenn
26
AMP-T2D consortium
14
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
108 results
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Clear Filters
ATAC-seq
ChIP-seq
Capture-C
tissue
kidney
64
in vitro differentiated cells
neural progenitor cell
10
13
adipocyte
1
1
osteoblast
1
1
cell line
HepG2
14
primary cell
hepatocyte
3
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