Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1610
candidate regulatory elements
1319
target gene predictions
970
histone modifications
811
binding sites
602
accessible chromatin
118
variant allelic effects
74
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2366
February, 2021
1617
September, 2022
324
November, 2021
291
February, 2024
286
May, 2021
June, 2020
133
May, 2020
100
October, 2022
70
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
34
August, 2017
28
February, 2023
19
April, 2020
15
May, 2022
14
October, 2019
12
November, 2019
8
April, 2019
8
May, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5502
bed bed3+
882
tsv
838
bed bed9
532
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5491
Homo sapiens
Biosample type
1970
cell line
1712
tissue
1518
primary cell
331
in vitro differentiated cells
4
stem cell
Organ
525
epithelium
311
connective tissue
297
kidney
294
brain
278
musculature of body
233
lung
218
intestine
178
bodily fluid
178
heart
173
limb
169
blood
168
embryo
165
vasculature
157
skin of body
155
pancreas
130
large intestine
127
blood vessel
106
extraembryonic component
97
liver
92
eye
stomach
74
uterus
69
mammary gland
65
bone element
63
small intestine
58
prostate gland
56
adrenal gland
54
placenta
51
penis
50
ureter
48
adipose tissue
46
lymph node
artery
37
thymus
33
gonad
31
esophagus
27
spinal cord
25
spleen
18
vein
17
testis
16
lymphoid tissue
16
ovary
16
thyroid gland
15
skeleton
14
nerve
13
bronchus
13
lymphatic vessel
12
mouth
11
bone marrow
11
pituitary gland
8
breast
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
5133
AMP
324
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5531
hg19
811
GRCh38
1
hg18
month_released!
June, 2020
organ_slims!
artery
stomach
BIOSAMPLE
TYPE
5537 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
MCF-7
9
6
2
3
+ See 742 more…
tissue
heart
37
20
1
1
3
2
2
kidney
29
14
2
1
9
1
2
1
brain
29
16
3
1
1
1
2
muscle of arm
33
16
1
1
lung
33
17
+ See 206 more…
primary cell
monocyte
2
86
1
16
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
1
3
4
embryonic stem cell
1
1
1
5
5
T-cell acute lymphoblastic leukemia
5
3
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download