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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1547
candidate regulatory elements
1280
target gene predictions
970
histone modifications
853
accessible chromatin
810
binding sites
113
variant allelic effects
75
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2312
February, 2021
1524
September, 2022
330
November, 2021
292
February, 2024
290
May, 2021
273
June, 2020
124
May, 2020
99
October, 2022
58
January, 2020
56
January, 2021
45
March, 2020
41
November, 2022
39
May, 2024
36
August, 2021
35
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
14
November, 2019
14
October, 2019
8
May, 2019
7
April, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5646
bed bed3+
790
bed bed9
648
tsv
510
bigWig
38
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5635
Homo sapiens
Biosample type
2094
cell line
1644
tissue
1586
primary cell
351
in vitro differentiated cells
4
stem cell
Organ
559
epithelium
339
connective tissue
315
brain
kidney
284
musculature of body
239
lung
228
intestine
190
bodily fluid
185
heart
181
blood
179
limb
178
embryo
174
vasculature
165
skin of body
159
pancreas
137
large intestine
131
blood vessel
112
extraembryonic component
104
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
48
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
19
vein
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
15
nerve
15
skeleton
14
bronchus
13
mouth
11
bone marrow
11
pituitary gland
9
breast
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5271
AMP
330
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5673
hg19
841
GRCh38
1
hg18
organ_slims!
kidney
tongue
BIOSAMPLE
TYPE
5681 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 751 more…
tissue
heart
37
20
1
5
1
2
2
stomach
40
21
1
3
brain
29
16
3
2
1
1
2
muscle of arm
33
16
1
1
lung
33
17
+ See 200 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 313 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
5
1
5
mesenchymal stem cell
3
3
1
1
1
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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