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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
38
histone
38
histone modification
20
broad histone mark
18
narrow histone mark
17
transcription factor
9
control
4
RNA binding protein
1
chromatin remodeller
Date released
11
August, 2017
November, 2017
5
December, 2017
2
August, 2021
Available data
408
bigWig
398
bed narrowPeak
375
bam
145
tagAlign
120
bigBed narrowPeak
99
fastq
15
bed broadPeak
13
bed bed3+
5
bigBed broadPeak
1
tagAlign bed3+
Organism
18
Homo sapiens
Biosample type
7
primary cell
6
tissue
4
in vitro differentiated cells
1
stem cell
Organ
6
pancreas
2
epithelium
2
liver
1
embryo
Project
18
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
18
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
November, 2017
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
primary cell
skeletal muscle myoblast
5
hepatocyte
2
tissue
islet of Langerhans
6
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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