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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1688
candidate regulatory elements
1341
target gene predictions
975
histone modifications
897
accessible chromatin
815
binding sites
121
variant allelic effects
38
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2394
February, 2021
1658
September, 2022
333
November, 2021
295
February, 2024
286
June, 2020
282
May, 2021
132
May, 2020
101
October, 2022
63
January, 2020
56
January, 2021
51
August, 2021
42
March, 2020
40
November, 2022
39
May, 2024
32
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
September, 2018
Available data
5906
bed bed3+
877
tsv
859
bed bed9
541
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5862
Homo sapiens
Biosample type
2122
cell line
1798
tissue
1636
primary cell
346
in vitro differentiated cells
4
stem cell
Organ
559
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
161
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
urinary bladder
6
vagina
5
trachea
3
nose
Project
5495
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5900
hg19
835
GRCh38
1
hg18
organ_slims!
adipose tissue
urinary bladder
BIOSAMPLE
TYPE
5908 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 758 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 208 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 331 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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