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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1563
candidate regulatory elements
1233
target gene predictions
944
histone modifications
779
binding sites
752
accessible chromatin
98
variant allelic effects
31
chromatin state
11
caQTL
9
gene expression
6
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
Date released
2294
February, 2021
1563
September, 2022
270
February, 2024
263
June, 2020
262
November, 2021
257
May, 2021
120
May, 2020
89
October, 2022
54
January, 2020
49
August, 2021
38
March, 2020
36
January, 2021
34
November, 2022
30
February, 2023
24
August, 2017
15
April, 2020
12
May, 2022
11
November, 2019
5
January, 2022
3
September, 2023
2
May, 2019
2
October, 2019
1
August, 2020
1
August, 2022
1
September, 2018
Available data
5425
bed bed3+
813
bed bed9
763
tsv
435
bigWig
101
txt
36
bigBed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5390
Homo sapiens
Biosample type
2075
cell line
1736
tissue
1319
primary cell
301
in vitro differentiated cells
3
stem cell
Organ
558
epithelium
connective tissue
310
kidney
309
brain
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
174
heart
168
vasculature
165
skin of body
pancreas
137
large intestine
128
blood vessel
112
extraembryonic component
110
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
47
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5119
AMP
262
ENCODE
40
T1D
15
LungMap
Genome assembly (visualization)
5420
hg19
703
GRCh38
1
hg18
organ_slims!
connective tissue
lymphatic vessel
pancreas
BIOSAMPLE
TYPE
5436 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
gene expression
eQTL
hQTL
meQTL
other
variant to gene
pQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 742 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
+ See 198 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 279 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
1
5
neuroblastoma cell line
6
2
+ See 91 more…
stem cell
H1-hESC
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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