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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
220
candidate regulatory elements
217
accessible chromatin
193
target gene predictions
52
binding sites
36
variant allelic effects
32
histone modifications
9
gene expression
4
chromatin state
2
caQTL
2
eQTL
Date released
235
September, 2022
174
February, 2021
127
November, 2021
67
February, 2024
29
June, 2020
21
May, 2021
20
January, 2021
15
November, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
10
October, 2022
8
April, 2020
5
October, 2019
4
August, 2017
3
March, 2020
2
May, 2022
1
November, 2019
Available data
756
bed bed3+
324
tsv
177
bigWig
116
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
767
Homo sapiens
Biosample type
465
primary cell
181
tissue
104
cell line
17
in vitro differentiated cells
Organ
558
epithelium
330
connective tissue
310
kidney
309
brain
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
174
heart
168
vasculature
165
skin of body
161
pancreas
137
large intestine
128
blood vessel
112
extraembryonic component
110
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
47
artery
38
thymus
37
gonad
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
612
AMP
127
ENCODE
20
T1D
8
LungMap
Genome assembly (visualization)
757
hg19
184
GRCh38
organ_slims!
esophagus
BIOSAMPLE
TYPE
767 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
variant allelic effects
histone modifications
gene expression
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
7
2
2
1
2
1
hepatocyte
1
8
3
1
2
4
5
endothelial cell of hepatic sinusoid
6
6
4
endothelial cell of umbilical vein
6
2
4
2
1
foreskin keratinocyte
11
4
+ See 95 more…
tissue
lung
33
17
left lung
26
13
right lung
22
1
11
pigmented layer of retina
20
upper lobe of left lung
7
1
3
1
1
+ See 15 more…
cell line
A549
21
1
19
2
1
EndoC_BH1
8
1
1
IMR-90
2
1
2
2
1
PC-9
2
1
2
1
1
WI38
5
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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