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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
1
snATAC-seq
Assay category
3
3D chromatin structure
1
DNA accessibility
Date released
3
July, 2019
1
May, 2022
Available data
300
bam
290
bigWig
263
bed narrowPeak
174
bigBed narrowPeak
133
tagAlign
93
bed broadPeak
bigBed broadPeak
69
bed bed3+
35
tsv
23
fastq
6
bed bedMethyl
6
bigBed bedMethyl
3
hdf5
2
bedpe bed3+
2
hic
1
bed bed3
1
tagAlign bed3+
1
txt
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Organ
22
pancreas
19
connective tissue
8
liver
5
epithelium
4
adipose tissue
3
brain
3
embryo
2
blood vessel
2
vasculature
1
musculature of body
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
4 results
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Hi-C
snATAC-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
tissue
skeletal muscle tissue
1
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