Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
4
pCHi-C
2
Capture-C
Assay category
4
DNA accessibility
Date released
4
February, 2023
2
August, 2021
2
February, 2021
2
March, 2020
May, 2022
Available data
3368
bam
bigWig
1779
bed narrowPeak
1600
tsv
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
272
bed bed3+
154
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
19
zippedFastqFolder
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
10
Homo sapiens
Biosample type
8
in vitro differentiated cells
1
cell line
1
primary cell
Organ
7
connective tissue
1
liver
Project
10
AMP
Genome assembly (visualization)
10
hg19
Lab
8
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
files.file_type!
bigWig
fastq
month_released!
May, 2022
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
pCHi-C
Capture-C
in vitro differentiated cells
adipocyte
1
1
immature adipocyte
2
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
osteoblast
1
+ See 1 more…
cell line
HepG2
1
primary cell
osteoblast
1
See all biosamples
Download