Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
DNase-seq
4
Hi-C
1
ChIP-seq
Assay category
38
DNA accessibility
4
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
34
June, 2019
4
July, 2019
3
October, 2019
2
November, 2018
Available data
393
bam
346
bigWig
308
bed narrowPeak
183
bigBed narrowPeak
124
tagAlign
93
tsv
55
bed broadPeak
46
bigBed broadPeak
42
bed bed3+
21
fastq
4
hdf5
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
1
bed bed3
1
tagAlign bed3+
1
tar
Organism
43
Homo sapiens
Biosample type
31
tissue
12
primary cell
Organ
78
kidney
36
brain
limb
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
43
AMP
Genome assembly (visualization)
39
GRCh38
32
hg19
Lab
43
AMP-T2D consortium
organ_slims!
limb
BIOSAMPLE
ASSAY
43 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
Hi-C
ChIP-seq
tissue
brain
14
coronary artery
2
frontal cortex
2
Ammon's horn
1
ascending aorta
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
endothelial cell of umbilical vein
2
astrocyte of the hippocampus
1
+ See 3 more…
See all biosamples
Download