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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
2
small RNA-seq
1
pCHi-C
1
snATAC-seq
Assay category
8
Transcription
1
DNA accessibility
Date released
4
July, 2019
3
March, 2020
2
February, 2020
1
May, 2022
Available data
68
bigWig
60
bed narrowPeak
57
bam
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
10
Homo sapiens
Biosample type
8
tissue
2
primary cell
Organ
497
connective tissue
439
pancreas
405
adipose tissue
182
liver
168
heart
161
epithelium
70
blood vessel
70
vasculature
58
artery
58
bone element
29
brain
24
kidney
17
embryo
10
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
10
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed bedgraph
bigBed narrowPeak
BIOSAMPLE
ASSAY
10 results
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Clear Filters
total RNA-seq
small RNA-seq
pCHi-C
snATAC-seq
tissue
psoas muscle
2
1
skeletal muscle tissue
1
1
1
gastrocnemius medialis
1
left ventricle myocardium
1
primary cell
skeletal muscle satellite cell
1
1
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