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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
Capture-C
1
snATAC-seq
1
whole genome sequencing assay
Assay category
3
DNA binding
1
DNA accessibility
1
DNA sequencing
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
6
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
144
bed narrowPeak
zippedFastqFolder
123
tsv
73
bam
67
bigWig
64
txt
64
xls
24
fastq
24
tagAlign
6
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
7
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
1
cell line
1
tissue
Organ
4
liver
3
epithelium
2
connective tissue
1
musculature of body
Project
7
AMP
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
4
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
1
Bing Ren, UCSD
Audit category:
1
audit script error
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
7 results
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Clear Filters
ChIP-seq
Capture-C
snATAC-seq
whole genome sequencing assay
primary cell
hepatocyte
3
in vitro differentiated cells
adipocyte
1
osteoblast
1
cell line
HepG2
1
tissue
skeletal muscle tissue
1
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