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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1154
target gene predictions
976
histone modifications
811
binding sites
767
accessible chromatin
68
variant allelic effects
13
caQTL
3
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
chromatin state
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
January, 2020
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5474
bed bed3+
863
bed bed9
816
tsv
415
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
5
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5428
Homo sapiens
Biosample type
1951
cell line
1770
tissue
1409
primary cell
339
in vitro differentiated cells
3
stem cell
Organ
454
epithelium
298
connective tissue
294
kidney
285
brain
264
musculature of body
237
lung
218
intestine
169
limb
163
skin of body
160
bodily fluid
159
heart
151
blood
140
vasculature
131
large intestine
126
embryo
113
pancreas
112
extraembryonic component
107
blood vessel
95
eye
90
stomach
81
liver
71
mammary gland
68
bone element
63
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
44
adipose tissue
44
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
26
spleen
25
uterus
19
testis
17
lymphoid tissue
17
ovary
16
thyroid gland
16
vein
15
skeleton
14
lymphatic vessel
13
bronchus
13
mouth
13
nerve
11
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5118
AMP
333
ENCODE
19
LungMap
3
T1D
1
ITG
Genome assembly (visualization)
5466
hg19
531
GRCh38
1
hg18
month_released!
August, 2017
February, 2024
January, 2020
January, 2021
BIOSAMPLE
TYPE
5474 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
chromatin state
sQTL
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
HepG2
2
3
5
3
2
+ See 752 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
2
kidney
29
14
2
1
8
1
1
brain
29
16
3
1
1
1
lung
33
17
+ See 203 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
4
30
3
common myeloid progenitor, CD34-positive
27
14
B cell
13
10
6
CD14-positive monocyte
8
19
+ See 311 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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