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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1043
target gene predictions
976
histone modifications
811
binding sites
545
accessible chromatin
68
variant allelic effects
35
chromatin state
13
caQTL
3
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
November, 2021
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
January, 2020
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5175
bed bed3+
863
bed bed9
816
tsv
193
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
5
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5129
Homo sapiens
Biosample type
1956
cell line
1788
tissue
1082
primary cell
343
in vitro differentiated cells
4
stem cell
Organ
330
epithelium
291
brain
291
kidney
256
musculature of body
255
connective tissue
229
lung
203
intestine
169
limb
162
bodily fluid
154
skin of body
153
blood
149
heart
135
vasculature
128
large intestine
125
embryo
109
extraembryonic component
105
blood vessel
98
pancreas
91
eye
82
stomach
78
liver
67
bone element
66
mammary gland
62
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
ureter
46
adipose tissue
46
adrenal gland
44
artery
37
thymus
35
gonad
29
spinal cord
27
esophagus
26
spleen
23
uterus
19
testis
17
lymphoid tissue
17
vein
15
ovary
15
skeleton
14
thyroid gland
13
mouth
13
nerve
11
bronchus
11
lymphatic vessel
11
pituitary gland
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5152
AMP
19
LungMap
3
T1D
1
ITG
Genome assembly (visualization)
5167
hg19
198
GRCh38
1
hg18
month_released!
February, 2024
January, 2020
January, 2021
November, 2021
BIOSAMPLE
TYPE
5175 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
HepG2
2
3
5
3
2
1
+ See 753 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
2
kidney
29
14
2
1
8
1
1
brain
29
16
3
1
1
1
lung
33
17
+ See 205 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
13
10
3
+ See 240 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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