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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1702
candidate regulatory elements
1179
target gene predictions
973
histone modifications
857
accessible chromatin
806
binding sites
68
variant allelic effects
34
chromatin state
13
caQTL
3
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2398
February, 2021
1674
September, 2022
333
November, 2021
February, 2024
286
June, 2020
284
May, 2021
134
May, 2020
100
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
39
May, 2024
33
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5647
bed bed3+
865
bed bed9
832
tsv
507
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
5
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5601
Homo sapiens
Biosample type
1955
cell line
1829
tissue
1511
primary cell
346
in vitro differentiated cells
4
stem cell
Organ
499
epithelium
324
connective tissue
309
brain
308
kidney
272
musculature of body
238
lung
222
intestine
175
limb
170
heart
164
skin of body
162
bodily fluid
154
vasculature
153
blood
139
pancreas
134
large intestine
127
embryo
113
blood vessel
112
extraembryonic component
97
eye
91
stomach
87
liver
72
mammary gland
70
bone element
64
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
26
spleen
25
uterus
19
testis
17
lymphatic vessel
17
lymphoid tissue
17
ovary
vein
16
thyroid gland
15
skeleton
14
nerve
13
bronchus
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
trachea
3
nose
Project
5235
AMP
333
ENCODE
59
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5639
hg19
631
GRCh38
1
hg18
month_released!
February, 2024
organ_slims!
trachea
vein
BIOSAMPLE
TYPE
5647 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
19
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
K562
7
7
1
1
2
1
HepG2
2
3
5
2
3
1
+ See 752 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 206 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
16
10
6
endothelial cell
3
7
1
14
2
2
+ See 318 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
3
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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