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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
953
histone modifications
799
binding sites
798
candidate regulatory elements
763
accessible chromatin
436
target gene predictions
113
variant allelic effects
35
chromatin state
13
caQTL
9
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2332
February, 2021
September, 2022
313
November, 2021
274
June, 2020
265
May, 2021
222
February, 2024
129
May, 2020
100
October, 2022
January, 2020
51
August, 2021
41
November, 2022
40
March, 2020
36
January, 2021
31
February, 2023
30
August, 2017
19
April, 2020
15
May, 2022
11
November, 2019
5
January, 2022
5
September, 2023
3
October, 2019
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
Available data
3930
bed bed3+
798
tsv
422
bigWig
108
txt
34
bed bed9+
32
bigBed bed9
30
bed bed9
21
csv
2
bigBed narrowPeak
1
bam
Organism
3884
Homo sapiens
Biosample type
1658
cell line
1171
primary cell
832
tissue
264
in vitro differentiated cells
3
stem cell
Organ
432
epithelium
241
connective tissue
171
brain
145
kidney
140
bodily fluid
140
musculature of body
135
blood
pancreas
embryo
119
intestine
102
vasculature
99
lung
97
skin of body
92
heart
78
eye
77
blood vessel
77
limb
72
large intestine
68
uterus
67
liver
47
stomach
46
extraembryonic component
45
mammary gland
42
bone element
38
lymph node
37
prostate gland
34
penis
30
adipose tissue
29
adrenal gland
29
artery
26
small intestine
24
placenta
22
ureter
21
gonad
19
esophagus
16
thymus
14
spleen
13
spinal cord
13
vein
11
pituitary gland
11
testis
10
bronchus
10
lymphatic vessel
9
bone marrow
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
7
nerve
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
3557
AMP
313
ENCODE
40
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3922
hg19
642
GRCh38
1
hg18
month_released!
January, 2020
September, 2022
organ_slims!
embryo
pancreas
BIOSAMPLE
TYPE
3930 results
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Clear Filters
histone modifications
binding sites
candidate regulatory elements
accessible chromatin
target gene predictions
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
1
2
52
K562
1
2
1
1
17
1
breast cancer cell
11
9
HFFc6
19
GM12878
1
2
1
1
7
1
+ See 720 more…
primary cell
monocyte
86
1
18
2
1
1
CD8-positive, alpha-beta T cell
30
7
4
5
endothelial cell
1
2
15
7
2
2
1
fibroblast
1
16
4
6
CD14-positive monocyte
4
15
+ See 305 more…
tissue
kidney
2
1
15
8
1
1
retina
1
1
3
22
1
stomach
1
21
3
2
heart
1
1
18
3
1
2
pigmented layer of retina
20
+ See 194 more…
in vitro differentiated cells
neural progenitor cell
14
1
10
1
adipocyte
1
1
2
4
4
4
hematopoietic multipotent progenitor cell
1
1
9
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
5
1
+ See 96 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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