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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1636
candidate regulatory elements
1263
target gene predictions
965
histone modifications
873
accessible chromatin
804
binding sites
122
variant allelic effects
39
chromatin state
12
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2346
February, 2021
1610
September, 2022
327
November, 2021
280
May, 2021
276
June, 2020
240
February, 2024
135
May, 2020
100
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
43
March, 2020
41
November, 2022
39
May, 2024
33
August, 2017
31
February, 2023
19
April, 2020
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5736
bed bed3+
888
tsv
835
bed bed9
535
bigWig
108
txt
40
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5690
Homo sapiens
Biosample type
2016
cell line
1796
tissue
1594
primary cell
325
in vitro differentiated cells
3
stem cell
Organ
555
epithelium
335
connective tissue
309
brain
309
kidney
278
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
embryo
175
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5329
AMP
327
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5728
hg19
776
GRCh38
1
hg18
month_released!
May, 2022
organ_slims!
embryo
esophagus
BIOSAMPLE
TYPE
5736 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 741 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 208 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
13
2
2
2
1
+ See 325 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 97 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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