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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1520
candidate regulatory elements
1260
target gene predictions
971
histone modifications
877
accessible chromatin
807
binding sites
123
variant allelic effects
39
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2328
February, 2021
1516
September, 2022
323
November, 2021
292
February, 2024
281
June, 2020
280
May, 2021
134
May, 2020
97
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
43
March, 2020
41
November, 2022
33
August, 2017
31
February, 2023
16
April, 2020
15
May, 2022
13
November, 2019
October, 2019
5
January, 2022
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5632
bed bed3+
783
bed bed9
618
tsv
527
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5586
Homo sapiens
Biosample type
2052
cell line
1675
tissue
1559
primary cell
341
in vitro differentiated cells
3
stem cell
Organ
542
epithelium
327
connective tissue
309
kidney
306
brain
281
musculature of body
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
172
heart
165
skin of body
163
vasculature
153
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5232
AMP
323
ENCODE
60
T1D
16
LungMap
1
ITG
Genome assembly (visualization)
5624
hg19
782
GRCh38
1
hg18
month_released!
October, 2019
September, 2023
organ_slims!
lung
thymus
BIOSAMPLE
TYPE
5632 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 752 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 212 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 322 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
3
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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