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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
DNase-seq
3
ChIP-seq
2
Hi-C
Assay category
14
DNA accessibility
3
DNA binding
2
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
14
June, 2019
3
August, 2021
2
July, 2019
Available data
296
bam
285
bigWig
257
fastq
155
tsv
138
bed narrowPeak
80
zippedFastqFolder
63
bigBed narrowPeak
19
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
2
hdf5
1
bedpe bed3+
1
hic
Organism
19
Homo sapiens
Biosample type
19
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
artery
4
eye
3
embryo
2
nerve
vein
1
spleen
Project
19
AMP
Genome assembly (visualization)
17
GRCh38
13
hg19
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2022
organ_slims!
artery
vein
BIOSAMPLE
ASSAY
19 results
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DNase-seq
ChIP-seq
Hi-C
primary cell
hepatocyte
1
3
brain microvascular endothelial cell
1
1
glomerular visceral epithelial cell
2
kidney tubule cell
2
choroid plexus epithelial cell
1
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