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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1601
candidate regulatory elements
1292
target gene predictions
962
histone modifications
881
accessible chromatin
796
binding sites
120
variant allelic effects
37
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2317
February, 2021
1582
September, 2022
323
November, 2021
292
February, 2024
278
June, 2020
276
May, 2021
132
May, 2020
97
October, 2022
63
January, 2020
56
January, 2021
51
August, 2021
42
March, 2020
40
November, 2022
39
May, 2024
31
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
September, 2018
Available data
5722
bed bed3+
875
tsv
821
bed bed9
535
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5676
Homo sapiens
Biosample type
2066
cell line
1762
tissue
1551
primary cell
337
in vitro differentiated cells
4
stem cell
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5319
AMP
323
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5714
hg19
824
GRCh38
1
hg18
organ_slims!
adipose tissue
skin of body
spleen
BIOSAMPLE
TYPE
5722 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 738 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 204 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 318 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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